RE: R&D Spotlight – Episode 13 Transcription16 Jan 2026 15:00
Slide 8
So on the left hand side we have our FAP doxorubicin docked into a FAP model, and then on the right hand side it's the comparative preCISION exatecan molecule.
These have similarities of course in terms of the preCISION peptide, so our d-alanine ProLine sequence, and then we have our warheads on the right hand side of these models.
So two key areas are the capping group on the left hand side in A and then our self-immolative Linker position B. It's important for preCISION exatecan to have the self-immolative linker to allow FAP cleavability.
That was one important learning we had early on in our project.
CC: How does the capping group work? What does the capping group do?
Ellen: Yes the capping group sits in the active sight of FAP, so it's to the left of the d-alanine of our FAP cleavable peptide, and because it sits in the binding pocket, it is important for achieving good binding affinity.
Which is what we have with our FAP exatecan molecule.
Slide 9
We've got a capping group that has good binding affinity, and can be held in the FAP active site, contributing to a sustained release.
The capping group is also important in the ADME (Absorption, distribution, metabolism, and excretion, - also known as “ADME,” are the internal processes that describe how a drug moves throughout and is processed by the body.) PK profile, and so we have our capping group enhances of plasma protein binding, - and has lower clearance as well, - again contributing to our sustained release.
CC: So the half-life in the plasma of FAP doxorubicin (Faridoxorubicin), we know that it's quite short, it's only about 45 minutes in patients. What do we expect the capping group to do here, with respect to that. We expect that to prolong essentially right?
Ellen: Yeah, so by having a better binding affinity, it's going to be held more tightly in our FAP binding pocket, and because of slower release as well, it's going to be held there and not turned over as quickly as we see with our FAP doxorubicin molecule.
CC: Okay, so tell us a little bit about the Linker. So Faridoxorubicin doesn't have a Linker. Why did we use these and what were we trying to achieve with the Linker?
Ellen: Yes the linker was important with exatecan is that it allowed us to release. So if we don't have a linker with exatecan, we actually don't get that cleavability, so the linker is vital to achieve this.
Also what that linker allows us to do is to vary the rate of cleavage, so the enzyme efficiency, so what we didn't want with our FAP exatecan molecule is a Linker that has high turnover, because we want that sustained release.
So with the linker we've chosen we have a slower release, or slower Kcat/Km (enzyme efficiency), that allows that more sustained release profile.
CC: So Ellen, now that we've designed the chemistry, we're going to fast forward on this next slide through a lot of work that was done in the preclinical setting.